Multi-Echo (fMRI) Data Analysis

Course Overview

• Course Overview

Getting Started

• Download Data
• Install Software
• Recommended Reading

Theoretical Background

• MR Physics
• Multi-Echo fMRI Sequences
• Signal Decay
• BOLD, non-BOLD, and TE-dependence with tedana
• Generate tedana walkthrough figures

Practical Resources

• Open Multi-Echo Datasets
• Acquiring Multi-Echo Data
• Processing Multi-Echo Data

Analysis Tutorials

• Optimal combination with t2smap
• Volume-wise T2*/S0 estimation with t2smap
• Multi-Echo Denoising with tedana
• Dual-Echo Denoising with nilearn
• Model-free deconvolution with pySPFM
• Cerebrovascular Reactivity Mapping
• Manual Classification with rica
• Denoising Data with ICA

Final Thoughts

• References
• Build Information
• Glossary